org.hl7.fhir.r4.model.Meta Java Examples

public Bundle process(String sourceFile) throws FileNotFoundException, SAXException, IOException, ParserConfigurationException {
  this.definitions = sourceFile;
  log("Begin. Produce Loinc CDEs in "+dest+" from "+definitions);
  loadLoinc();
  log("LOINC loaded");

  now = DateTimeType.now();

  bundle = new Bundle();
  bundle.setType(BundleType.COLLECTION);
  bundle.setId("http://hl7.org/fhir/commondataelement/loinc");
  bundle.setMeta(new Meta().setLastUpdatedElement(InstantType.now()));

  processLoincCodes();
  return bundle;
}
 

public void process() throws FHIRFormatError, IOException, XmlPullParserException, SAXException, ParserConfigurationException {
	log("Begin. Produce Loinc CDEs in "+dest+" from "+definitions);
	loadLoinc();
	log("LOINC loaded");

	now = DateTimeType.now();

	bundle = new Bundle();
	bundle.setId("http://hl7.org/fhir/commondataelement/loinc");
   bundle.setMeta(new Meta().setLastUpdatedElement(InstantType.now()));

	processLoincCodes();
	if (dest != null) {
		log("Saving...");
		saveBundle();
	}
	log("Done");

}
 

public static CodeSystem makeShareable(CodeSystem cs) {
  if (!cs.hasMeta())
    cs.setMeta(new Meta());
  for (UriType t : cs.getMeta().getProfile()) 
    if (t.getValue().equals("http://hl7.org/fhir/StructureDefinition/shareablecodesystem"))
      return cs;
  cs.getMeta().getProfile().add(new CanonicalType("http://hl7.org/fhir/StructureDefinition/shareablecodesystem"));
  return cs;
}
 

public static ValueSet makeShareable(ValueSet vs) {
  if (!vs.hasMeta())
    vs.setMeta(new Meta());
  for (UriType t : vs.getMeta().getProfile()) 
    if (t.getValue().equals("http://hl7.org/fhir/StructureDefinition/shareablevalueset"))
      return vs;
  vs.getMeta().getProfile().add(new CanonicalType("http://hl7.org/fhir/StructureDefinition/shareablevalueset"));
  return vs;
}
 

@Test
public void testMetaSecurity() {
  Meta meta = new Meta();
  Coding coding = meta.addSecurity().setSystem(TEST_SYSTEM).setCode(TEST_CODE);
  Assertions.assertTrue(meta.hasSecurity());
  Assertions.assertNotNull(meta.getSecurity());
  Assertions.assertNotNull(meta.getSecurity(TEST_SYSTEM, TEST_CODE));
  Assertions.assertEquals(1, meta.getSecurity().size());
  Assertions.assertEquals(meta.getSecurity().get(0), meta.getSecurity(TEST_SYSTEM, TEST_CODE));
  Assertions.assertEquals(meta.getSecurityFirstRep(), meta.getSecurity(TEST_SYSTEM, TEST_CODE));
  Assertions.assertEquals(coding, meta.getSecurity(TEST_SYSTEM, TEST_CODE));
}
 

public static Meta meta(Resource resource) {
  if (!resource.hasMeta())
    resource.setMeta(new Meta());
  return resource.getMeta();
}
 

default void mapMetaData(Identifiable source, DomainResource target) {
	Meta meta = new Meta();
	meta.setLastUpdated(new Date(source.getLastupdate()));
	target.setMeta(meta);
}
 

@SuppressWarnings("unchecked")
private void createBundle(){
	try {
		Date now = new Date();
		
		this.bundle = new Bundle();
		bundle.setId("BundleFromPractitioner");
		bundle.setMeta(new Meta().setLastUpdated(now).setProfile(Collections.singletonList(
			new CanonicalType("http://fhir.ch/ig/ch-crl/StructureDefinition/ch-crl-bundle"))));
		bundle.setType(BundleType.DOCUMENT);
		
		BundleEntryComponent compositionEntry = bundle.addEntry();
		Composition composition = new Composition();
		compositionEntry.setResource(composition);
		composition.setId("CompFromPractitioner");
		composition.setMeta(new Meta().setLastUpdated(now)
			.setProfile(Collections.singletonList(new CanonicalType(
				"http://fhir.ch/ig/ch-crl/StructureDefinition/ch-crl-composition"))));
		composition.setStatus(CompositionStatus.FINAL);
		composition.setType(new CodeableConcept(
			new Coding("http://loinc.org", "72134-0", "Cancer event report")));
		composition.setDate(now);
		composition.setTitle("Report to the Cancer Registry");
		
		BundleEntryComponent subjectEntry = bundle.addEntry();
		IFhirTransformer<Patient, IPatient> patientTransformer =
			(IFhirTransformer<Patient, IPatient>) FhirTransformersHolder
				.getTransformerFor(Patient.class, IPatient.class);
		Patient subject = patientTransformer.getFhirObject(patient)
			.orElseThrow(() -> new IllegalStateException("Could not create subject"));
		subject.getExtension().clear();
		fixAhvIdentifier(subject);
		
		subjectEntry.setResource(subject);
		
		BundleEntryComponent practitionerEntry = bundle.addEntry();
		IFhirTransformer<Practitioner, IMandator> practitionerTransformer =
			(IFhirTransformer<Practitioner, IMandator>) FhirTransformersHolder
				.getTransformerFor(Practitioner.class, IMandator.class);
		Practitioner practitioner = practitionerTransformer.getFhirObject(author)
			.orElseThrow(() -> new IllegalStateException("Could not create autor"));
		practitioner.getExtension().clear();
		practitioner.getIdentifier().clear();
		practitionerEntry.setResource(practitioner);
		
		BundleEntryComponent documentReferenceEntry = bundle.addEntry();
		DocumentReference documentReference = new DocumentReference();
		documentReferenceEntry.setResource(documentReference);
		documentReference.setId(document.getId());
		DocumentReferenceContentComponent content = documentReference.addContent();
		content.setAttachment(new Attachment().setContentType("application/pdf")
			.setData(IOUtils.toByteArray(document.getContent())));
		
		composition.setSubject(new Reference(subject));
		composition.setAuthor(Collections.singletonList(new Reference(practitioner)));
		SectionComponent section = composition.addSection();
		section.addEntry(new Reference(documentReference));
	} catch (IOException e) {
		LoggerFactory.getLogger(getClass()).error("Error creating FHIR bundle", e);
		throw new IllegalStateException("Error creating FHIR bundle", e);
	}
}