org.apache.uima.resource.metadata.TypeSystemDescription Java Examples
The following examples show how to use
org.apache.uima.resource.metadata.TypeSystemDescription.
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Example #1
Source File: AnnotationSchemaServiceImpl.java From webanno with Apache License 2.0 | 6 votes |
@Override public TypeSystemDescription getFullProjectTypeSystem(Project aProject, boolean aIncludeInternalTypes) throws ResourceInitializationException { List<TypeSystemDescription> typeSystems = new ArrayList<>(); // Types detected by uimaFIT typeSystems.add(createTypeSystemDescription()); if (aIncludeInternalTypes) { // Types internally used by WebAnno (which we intentionally exclude from being detected // by uimaFIT because we want to have an easy way to create a type system excluding // these types when we export files from the project typeSystems.add(CasMetadataUtils.getInternalTypeSystem()); } // Types declared within the project typeSystems.add(getCustomProjectTypes(aProject)); return mergeTypeSystems(typeSystems); }
Example #2
Source File: SerDesTest6.java From uima-uimaj with Apache License 2.0 | 6 votes |
public void testDocText() { try { CAS cas = CasCreationUtils.createCas((TypeSystemDescription) null, null, null); cas.setDocumentLanguage("latin"); cas.setDocumentText("test"); ByteArrayOutputStream baos = new ByteArrayOutputStream(1024); Serialization.serializeWithCompression(cas, baos, cas.getTypeSystem()); CAS cas2 = CasCreationUtils.createCas((TypeSystemDescription) null, null, null); ByteArrayInputStream bais = new ByteArrayInputStream(baos.toByteArray()); Serialization.deserializeCAS(cas2, bais); assertEquals("latin", cas2.getDocumentLanguage()); assertEquals("test", cas2.getDocumentText()); } catch (Exception e) { throw new RuntimeException(e); } }
Example #3
Source File: ComplexTypeTest.java From webanno with Apache License 2.0 | 6 votes |
@Test public void thatIntegerValueInConditionWorks() throws Exception { TypeSystemDescription tsd = TypeSystemDescriptionFactory .createTypeSystemDescription("desc.types.TestTypeSystemDescriptor"); CAS cas = createCas(tsd, null, null); cas.setDocumentText("blah"); AnnotationFS continent = cas.createAnnotation(getType(cas, "de.Continent"), 0, 1); FSUtil.setFeature(continent, "area", 100); cas.addFsToIndexes(continent); ConstraintsGrammar parser = new ConstraintsGrammar(new FileInputStream( "src/test/resources/rules/region.rules")); ParsedConstraints constraints = parser.Parse().accept(new ParserVisitor()); Evaluator constraintsEvaluator = new ValuesGenerator(); List<PossibleValue> possibleValues = constraintsEvaluator.generatePossibleValues(continent, "name", constraints); assertThat(possibleValues) .extracting(PossibleValue::getValue) .containsExactlyInAnyOrder("Fantasy Island"); }
Example #4
Source File: RoomNumberAnnotator1Test.java From uima-uimafit with Apache License 2.0 | 6 votes |
/** * This test is a bit better because we don't need a descriptor file for the analysis engine. We * still need a descriptor file for the type system but this isn't so bad as we expect there to be * a descriptor file for the type system as it is used to generate the Java jCas types. We are * still, unfortunately, creating a new JCas which is not so great. */ @Test public void testRNA2() throws Exception { TypeSystemDescription typeSystemDescription = TypeSystemDescriptionFactory .createTypeSystemDescription("org.apache.uima.fit.examples.TypeSystem"); AnalysisEngine roomNumberAnnotatorAE = AnalysisEngineFactory.createEngine( RoomNumberAnnotator.class, typeSystemDescription); JCas jCas = roomNumberAnnotatorAE.newJCas(); jCas.setDocumentText("The meeting is over at Yorktown 01-144"); roomNumberAnnotatorAE.process(jCas); RoomNumber roomNumber = JCasUtil.selectByIndex(jCas, RoomNumber.class, 0); assertNotNull(roomNumber); assertEquals("01-144", roomNumber.getCoveredText()); assertEquals("Yorktown", roomNumber.getBuilding()); }
Example #5
Source File: AgreementTestUtils.java From webanno with Apache License 2.0 | 6 votes |
public static TypeSystemDescription createMultiLinkWithRoleTestTypeSystem(String... aFeatures) throws Exception { List<TypeSystemDescription> typeSystems = new ArrayList<>(); TypeSystemDescription tsd = new TypeSystemDescription_impl(); // Link type TypeDescription linkTD = tsd.addType(LINK_TYPE, "", CAS.TYPE_NAME_TOP); linkTD.addFeature("role", "", CAS.TYPE_NAME_STRING); linkTD.addFeature("target", "", CAS.TYPE_NAME_ANNOTATION); // Link host TypeDescription hostTD = tsd.addType(HOST_TYPE, "", CAS.TYPE_NAME_ANNOTATION); hostTD.addFeature("links", "", CAS.TYPE_NAME_FS_ARRAY, linkTD.getName(), false); for (String feature : aFeatures) { hostTD.addFeature(feature, "", CAS.TYPE_NAME_STRING); } typeSystems.add(tsd); typeSystems.add(TypeSystemDescriptionFactory.createTypeSystemDescription()); return CasCreationUtils.mergeTypeSystems(typeSystems); }
Example #6
Source File: JcasSofaTest.java From uima-uimaj with Apache License 2.0 | 6 votes |
public void testGetSofa() throws Exception { try { File typeSystemFile = JUnitExtension.getFile("ExampleCas/testTypeSystem.xml"); TypeSystemDescription typeSystem = UIMAFramework.getXMLParser().parseTypeSystemDescription( new XMLInputSource(typeSystemFile)); CAS newCas = CasCreationUtils.createCas(typeSystem, null, null); File xcasFile = JUnitExtension.getFile("ExampleCas/multiSofaCas.xml"); XCASDeserializer.deserialize(new FileInputStream(xcasFile), newCas); JCas newJCas = newCas.getJCas(); SofaID sofaId = new SofaID_impl("EnglishDocument"); JCas view = newJCas.getView(newJCas.getSofa(sofaId)); } catch (Exception e) { JUnitExtension.handleException(e); } }
Example #7
Source File: ExternalRecommenderIntegrationTest.java From inception with Apache License 2.0 | 6 votes |
private List<CAS> loadData(Dataset ds, File ... files) throws UIMAException, IOException { CollectionReader reader = createReader(Conll2002Reader.class, Conll2002Reader.PARAM_PATTERNS, files, Conll2002Reader.PARAM_LANGUAGE, ds.getLanguage(), Conll2002Reader.PARAM_COLUMN_SEPARATOR, Conll2002Reader.ColumnSeparators.TAB.getName(), Conll2002Reader.PARAM_HAS_TOKEN_NUMBER, true, Conll2002Reader.PARAM_HAS_HEADER, true, Conll2002Reader.PARAM_HAS_EMBEDDED_NAMED_ENTITY, true); List<CAS> casList = new ArrayList<>(); while (reader.hasNext()) { // Add the CasMetadata type to the CAS List<TypeSystemDescription> typeSystems = new ArrayList<>(); typeSystems.add(createTypeSystemDescription()); typeSystems.add(CasMetadataUtils.getInternalTypeSystem()); JCas cas = JCasFactory.createJCas(mergeTypeSystems(typeSystems)); reader.getNext(cas.getCas()); casList.add(cas.getCas()); } return casList; }
Example #8
Source File: TypeSystemUtil.java From uima-uimaj with Apache License 2.0 | 6 votes |
/** * Convert a {@link TypeSystem} to an equivalent {@link TypeSystemDescription}. * * @param aTypeSystem * type system object to convert * @return a TypeSystemDescription that is equivalent to <code>aTypeSystem</code> */ public static TypeSystemDescription typeSystem2TypeSystemDescription(TypeSystem aTypeSystem) { ResourceSpecifierFactory fact = UIMAFramework.getResourceSpecifierFactory(); TypeSystemDescription tsDesc = fact.createTypeSystemDescription(); Iterator<Type> typeIter = aTypeSystem.getTypeIterator(); List<TypeDescription> typeDescs = new ArrayList<>(); while (typeIter.hasNext()) { Type type = typeIter.next(); if (!type.getName().startsWith("uima.cas") && !type.getName().equals("uima.tcas.Annotation") && !type.isArray()) { typeDescs.add(type2TypeDescription(type, aTypeSystem)); } } TypeDescription[] typeDescArr = new TypeDescription[typeDescs.size()]; typeDescs.toArray(typeDescArr); tsDesc.setTypes(typeDescArr); return tsDesc; }
Example #9
Source File: RecommenderTestHelper.java From inception with Apache License 2.0 | 6 votes |
public static void addScoreFeature(CAS aCas, String aTypeName, String aFeatureName) throws IOException, UIMAException { String scoreFeatureName = aFeatureName + FEATURE_NAME_SCORE_SUFFIX; String scoreExplanationFeatureName = aFeatureName + FEATURE_NAME_SCORE_EXPLANATION_SUFFIX; TypeSystemDescription tsd = typeSystem2TypeSystemDescription(aCas.getTypeSystem()); TypeDescription typeDescription = tsd.getType(aTypeName); typeDescription.addFeature(scoreFeatureName, "Confidence feature", TYPE_NAME_DOUBLE); typeDescription.addFeature(scoreExplanationFeatureName, "Confidence explanation feature", TYPE_NAME_STRING); typeDescription.addFeature(FEATURE_NAME_IS_PREDICTION, "Is prediction", TYPE_NAME_BOOLEAN); AnnotationSchemaService schemaService = new AnnotationSchemaServiceImpl(); schemaService.upgradeCas(aCas, tsd); }
Example #10
Source File: TypeSection.java From uima-uimaj with Apache License 2.0 | 6 votes |
@Override public void refresh() { super.refresh(); tt.removeAll(); TypeSystemDescription tsdFull = getMergedTypeSystemDescription(); TypeDescription[] tdsFull = tsdFull.getTypes(); if (null != tdsFull) { for (int i = 0; i < tdsFull.length; i++) { addTypeToGUI(tdsFull[i]); } } if (tt.getItemCount() > 0) tt.setSelection(tt.getItems()[0]); packTree(tt); enable(); }
Example #11
Source File: AgreementTestUtils.java From webanno with Apache License 2.0 | 6 votes |
public static JCas readXMI(String aPath, TypeSystemDescription aType) throws UIMAException, IOException { CollectionReader reader = createReader(XmiReader.class, XmiReader.PARAM_SOURCE_LOCATION, "src/test/resources/" + aPath); JCas jcas; if (aType != null) { TypeSystemDescription builtInTypes = TypeSystemDescriptionFactory .createTypeSystemDescription(); List<TypeSystemDescription> allTypes = new ArrayList<>(); allTypes.add(builtInTypes); allTypes.add(aType); jcas = JCasFactory.createJCas(CasCreationUtils.mergeTypeSystems(allTypes)); } else { jcas = JCasFactory.createJCas(); } reader.getNext(jcas.getCas()); return jcas; }
Example #12
Source File: DefinedTypesWithSupers.java From uima-uimaj with Apache License 2.0 | 6 votes |
/** * Update. */ private void update() { cachedResult.clear(); // for aggregates, this is the fully-merged type system // for all systems, it is the type system with imports resolved TypeSystemDescription typeSystemDescription = modelRoot.getMergedTypeSystemDescription(); if (typeSystemDescription == null) return; // cleared table TypeDescription[] types = typeSystemDescription.getTypes(); TypeSystem typeSystem = modelRoot.descriptorCAS.get().getTypeSystem(); String typeName; Map allTypes = modelRoot.allTypes.get(); for (int i = 0; i < types.length; i++) { cachedResult.add(typeName = types[i].getName()); Type nextType = (Type) allTypes.get(typeName); while (nextType != null) { nextType = typeSystem.getParent(nextType); if (nextType != null) cachedResult.add(nextType.getName()); } } }
Example #13
Source File: CasIOUtilsTest.java From uima-uimaj with Apache License 2.0 | 6 votes |
protected void setUp() throws Exception { File indexesFile = JUnitExtension.getFile("ExampleCas/testIndexes.xml"); FsIndexDescription[] indexes = UIMAFramework.getXMLParser() .parseFsIndexCollection(new XMLInputSource(indexesFile)).getFsIndexes(); File typeSystemFile = JUnitExtension.getFile("ExampleCas/testTypeSystem.xml"); TypeSystemDescription typeSystem = UIMAFramework.getXMLParser().parseTypeSystemDescription( new XMLInputSource(typeSystemFile)); cas = CasCreationUtils.createCas(typeSystem, new TypePriorities_impl(), indexes); try (FileInputStream casInputStream = new FileInputStream( JUnitExtension.getFile("ExampleCas/simpleCas.xmi"))) { CasIOUtils.load(casInputStream, cas); } File typeSystemFile2 = JUnitExtension.getFile("ExampleCas/testTypeSystem_variation.xml"); TypeSystemDescription typeSystem2 = UIMAFramework.getXMLParser().parseTypeSystemDescription( new XMLInputSource(typeSystemFile2)); cas2 = CasCreationUtils.createCas(typeSystem2, new TypePriorities_impl(), indexes); }
Example #14
Source File: WebAnnoTsv3WriterTestBase.java From webanno with Apache License 2.0 | 6 votes |
@Test public void testTwoSentencesWithNoSpaceInBetween() throws Exception { TypeSystemDescription global = TypeSystemDescriptionFactory.createTypeSystemDescription(); TypeSystemDescription local = TypeSystemDescriptionFactory .createTypeSystemDescriptionFromPath( "src/test/resources/desc/type/webannoTestTypes.xml"); TypeSystemDescription merged = CasCreationUtils.mergeTypeSystems(asList(global, local)); JCas jcas = JCasFactory.createJCas(merged); DocumentMetaData.create(jcas).setDocumentId("doc"); jcas.setDocumentText("onetwo"); new Token(jcas, 0, 3).addToIndexes(); new Sentence(jcas, 0, 3).addToIndexes(); new Token(jcas, 3, 6).addToIndexes(); new Sentence(jcas, 3, 6).addToIndexes(); writeAndAssertEquals(jcas); }
Example #15
Source File: CurationTestUtils.java From webanno with Apache License 2.0 | 6 votes |
public static TypeSystemDescription createMultiLinkWithRoleTestTypeSytem() throws Exception { List<TypeSystemDescription> typeSystems = new ArrayList<>(); TypeSystemDescription tsd = new TypeSystemDescription_impl(); // Link type TypeDescription linkTD = tsd.addType(LINK_TYPE, "", CAS.TYPE_NAME_TOP); linkTD.addFeature("role", "", CAS.TYPE_NAME_STRING); linkTD.addFeature("target", "", CAS.TYPE_NAME_ANNOTATION); // Link host TypeDescription hostTD = tsd.addType(HOST_TYPE, "", CAS.TYPE_NAME_ANNOTATION); hostTD.addFeature("links", "", CAS.TYPE_NAME_FS_ARRAY, linkTD.getName(), false); typeSystems.add(tsd); typeSystems.add(TypeSystemDescriptionFactory.createTypeSystemDescription()); return CasCreationUtils.mergeTypeSystems(typeSystems); }
Example #16
Source File: CasCreationUtilsTest.java From uima-uimaj with Apache License 2.0 | 6 votes |
public void testCreateCasTypeSystemDescription() throws Exception { try { //parse type system description TypeSystemDescription tsDesc = UIMAFramework.getXMLParser().parseTypeSystemDescription( new XMLInputSource(JUnitExtension.getFile("CasCreationUtilsTest/SupertypeMergeTestMaster.xml"))); // call method CAS cas = CasCreationUtils.createCas(tsDesc, null, null); //check that imports were resolved and supertype merged properly Type subType = cas.getTypeSystem().getType("uima.test.Sub"); assertNotNull(subType); Type superType = cas.getTypeSystem().getType("uima.test.Super"); assertNotNull(superType); assertTrue(cas.getTypeSystem().subsumes(superType,subType)); } catch (Exception e) { JUnitExtension.handleException(e); } }
Example #17
Source File: RelationLayerSupport.java From webanno with Apache License 2.0 | 6 votes |
@Override public void generateTypes(TypeSystemDescription aTsd, AnnotationLayer aLayer, List<AnnotationFeature> aAllFeaturesInProject) { TypeDescription td = aTsd.addType(aLayer.getName(), aLayer.getDescription(), TYPE_NAME_ANNOTATION); AnnotationLayer attachType = aLayer.getAttachType(); td.addFeature(FEAT_REL_TARGET, "", attachType.getName()); td.addFeature(FEAT_REL_SOURCE, "", attachType.getName()); List<AnnotationFeature> featureForLayer = aAllFeaturesInProject.stream() .filter(feature -> aLayer.equals(feature.getLayer())) .collect(toList()); generateFeatures(aTsd, td, featureForLayer); }
Example #18
Source File: DiffTestUtils.java From webanno with Apache License 2.0 | 6 votes |
public static TypeSystemDescription createMultiLinkWithRoleTestTypeSytem(String... aFeatures) throws Exception { List<TypeSystemDescription> typeSystems = new ArrayList<>(); TypeSystemDescription tsd = new TypeSystemDescription_impl(); // Link type TypeDescription linkTD = tsd.addType(LINK_TYPE, "", CAS.TYPE_NAME_TOP); linkTD.addFeature("role", "", CAS.TYPE_NAME_STRING); linkTD.addFeature("target", "", Token.class.getName()); // Link host TypeDescription hostTD = tsd.addType(HOST_TYPE, "", CAS.TYPE_NAME_ANNOTATION); hostTD.addFeature("links", "", CAS.TYPE_NAME_FS_ARRAY, linkTD.getName(), false); for (String feature : aFeatures) { hostTD.addFeature(feature, "", CAS.TYPE_NAME_STRING); } typeSystems.add(tsd); typeSystems.add(TypeSystemDescriptionFactory.createTypeSystemDescription()); return CasCreationUtils.mergeTypeSystems(typeSystems); }
Example #19
Source File: SpanLayerSupport.java From webanno with Apache License 2.0 | 5 votes |
@Override public void generateTypes(TypeSystemDescription aTsd, AnnotationLayer aLayer, List<AnnotationFeature> aAllFeaturesInProject) { TypeDescription td = aTsd.addType(aLayer.getName(), aLayer.getDescription(), CAS.TYPE_NAME_ANNOTATION); List<AnnotationFeature> featureForLayer = aAllFeaturesInProject.stream() .filter(feature -> aLayer.equals(feature.getLayer())) .collect(toList()); generateFeatures(aTsd, td, featureForLayer); }
Example #20
Source File: AnnotationSchemaServiceImpl.java From webanno with Apache License 2.0 | 5 votes |
/** * Load the contents from the source CAS, upgrade it to the target type system and write the * results to the target CAS. An in-place upgrade can be achieved by using the same CAS as * source and target. */ @Override public void upgradeCas(CAS aSourceCas, CAS aTargetCas, TypeSystemDescription aTargetTypeSystem) throws UIMAException, IOException { CasStorageSession.get().assertWritingPermitted(aTargetCas); // Save source CAS type system (do this early since we might do an in-place upgrade) TypeSystem sourceTypeSystem = aSourceCas.getTypeSystem(); // Save source CAS contents ByteArrayOutputStream serializedCasContents = new ByteArrayOutputStream(); CAS realSourceCas = getRealCas(aSourceCas); // UIMA-6162 Workaround: synchronize CAS during de/serialization synchronized (((CASImpl) realSourceCas).getBaseCAS()) { serializeWithCompression(realSourceCas, serializedCasContents, sourceTypeSystem); } // Re-initialize the target CAS with new type system CAS realTargetCas = getRealCas(aTargetCas); // UIMA-6162 Workaround: synchronize CAS during de/serialization synchronized (((CASImpl) realTargetCas).getBaseCAS()) { CAS tempCas = CasFactory.createCas(aTargetTypeSystem); CASCompleteSerializer serializer = serializeCASComplete((CASImpl) tempCas); deserializeCASComplete(serializer, (CASImpl) realTargetCas); // Leniently load the source CAS contents into the target CAS CasIOUtils.load(new ByteArrayInputStream(serializedCasContents.toByteArray()), getRealCas(aTargetCas), sourceTypeSystem); } }
Example #21
Source File: TypeSystemAnalysisTest.java From webanno with Apache License 2.0 | 5 votes |
@Test public void testSpanWithSlotFeatures() throws Exception { TypeSystemDescription tsd = createTypeSystemDescription("tsd/spanWithSlotFeatures"); TypeSystemAnalysis analysis = TypeSystemAnalysis.of(tsd); AnnotationLayer slotSpanLayer = new AnnotationLayer(); slotSpanLayer.setName("webanno.custom.SlotSpan"); slotSpanLayer.setUiName("SlotSpan"); slotSpanLayer.setType(WebAnnoConst.SPAN_TYPE); slotSpanLayer.setAnchoringMode(AnchoringMode.CHARACTERS); slotSpanLayer.setOverlapMode(OverlapMode.ANY_OVERLAP); slotSpanLayer.setCrossSentence(true); AnnotationFeature freeSlot = new AnnotationFeature( "freeSlot", CAS.TYPE_NAME_ANNOTATION); AnnotationFeature boundSlot = new AnnotationFeature( "boundSlot", "webanno.custom.SlotSpan"); SoftAssertions softly = new SoftAssertions(); softly.assertThat(analysis.getLayers()) .containsExactly(slotSpanLayer) .usingFieldByFieldElementComparator(); softly.assertThat(analysis.getFeatures(slotSpanLayer.getName())) .containsExactlyInAnyOrder(freeSlot, boundSlot) .usingFieldByFieldElementComparator(); softly.assertAll(); }
Example #22
Source File: Conll2012FormatSupport.java From webanno with Apache License 2.0 | 5 votes |
@Override public CollectionReaderDescription getReaderDescription(TypeSystemDescription aTSD) throws ResourceInitializationException { return createReaderDescription(Conll2012Reader.class, aTSD, // Constituents are not supported by WebAnno and trying to read a file which does // not have them triggers an NPE in DKPro Core 1.11.0 Conll2012Reader.PARAM_READ_CONSTITUENT, false); }
Example #23
Source File: CasDefinition.java From uima-uimaj with Apache License 2.0 | 5 votes |
public CasDefinition(TypeSystemDescription aTypeSystem, TypePriorities aTypePriorities, FsIndexDescription[] aFsIndexes, ResourceManager aResourceManager, Properties aPerformanceTuningSettings) { this.typeSystemDescription = aTypeSystem; this.typePriorities = aTypePriorities; this.fsIndexDescriptions = aFsIndexes; this.resourceManager = aResourceManager; }
Example #24
Source File: WebAnnoCasUtilTest.java From webanno with Apache License 2.0 | 5 votes |
@Test public void thatCreateDocumentMetadataUpgradesExistingDocumentAnnotation() throws Exception { TypeSystemDescription tsd = createTypeSystemDescription(); CAS cas = getRealCas(createCas(tsd)); assertThat(cas.select(DocumentAnnotation.class).asList()) .as("CAS has no DocumentAnnotation") .isEmpty(); cas.setDocumentLanguage("en"); assertThat(cas.select(DocumentAnnotation.class).asList()) .as("CAS initialized with DocumentAnnotation") .extracting(fs -> fs.getType().getName()) .containsExactly(TYPE_NAME_DOCUMENT_ANNOTATION); assertThat(cas.select(DocumentAnnotation.class).asList()) .as("Language has been set") .extracting(DocumentAnnotation::getLanguage) .containsExactly("en"); WebAnnoCasUtil.createDocumentMetadata(cas); assertThat(cas.select(DocumentAnnotation.class).asList()) .as("DocumentAnnotation has been upgraded to DocumentMetaData") .extracting(fs -> fs.getType().getName()) .containsExactly(DocumentMetaData.class.getName()); assertThat(cas.select(DocumentAnnotation.class).asList()) .as("Language survived upgrade") .extracting(DocumentAnnotation::getLanguage) .containsExactly("en"); }
Example #25
Source File: Tsv3XSerializerTest.java From webanno with Apache License 2.0 | 5 votes |
private JCas makeJCasOneSentence(String aText) throws UIMAException { TypeSystemDescription global = TypeSystemDescriptionFactory.createTypeSystemDescription(); TypeSystemDescription local = TypeSystemDescriptionFactory .createTypeSystemDescriptionFromPath( "src/test/resources/desc/type/webannoTestTypes.xml"); TypeSystemDescription merged = CasCreationUtils.mergeTypeSystems(asList(global, local)); JCas jcas = JCasFactory.createJCas(merged); DocumentMetaData.create(jcas).setDocumentId("doc"); TokenBuilder<Token, Sentence> tb = new TokenBuilder<>(Token.class, Sentence.class); tb.buildTokens(jcas, aText); // Remove the sentences generated by the token builder which treats the line break as a // sentence break for (Sentence s : select(jcas, Sentence.class)) { s.removeFromIndexes(); } // Add a new sentence covering the whole text new Sentence(jcas, 0, jcas.getDocumentText().length()).addToIndexes(); return jcas; }
Example #26
Source File: CasCreationUtilsTest.java From uima-uimaj with Apache License 2.0 | 5 votes |
public void testStringSubtype() throws Exception { try { TypeSystemDescription ts1desc = UIMAFramework.getXMLParser() .parseTypeSystemDescription( new XMLInputSource(JUnitExtension .getFile("CasCreationUtilsTest/TypeSystemMergeStringSubtypeBasePlus.xml"))); TypeSystemDescription result = checkMergeTypeSystem(ts1desc, "TypeSystemMergeStringSubtypeBase.xml", ResourceInitializationException.ALLOWED_VALUES_NOT_IDENTICAL); } catch (Exception e) { JUnitExtension.handleException(e); } }
Example #27
Source File: NifFormatSupport.java From inception with Apache License 2.0 | 5 votes |
@Override public AnalysisEngineDescription getWriterDescription(Project aProject, TypeSystemDescription aTSD, CAS aCAS) throws ResourceInitializationException { return createEngineDescription(NifWriter.class, aTSD); }
Example #28
Source File: DiffTestUtils.java From webanno with Apache License 2.0 | 5 votes |
public static Map<String, List<JCas>> loadXMI(TypeSystemDescription aTypes, String... aPaths) throws UIMAException, IOException { Map<String, List<JCas>> casByUser = new LinkedHashMap<>(); int n = 1; for (String path : aPaths) { JCas cas = readXMI(path, aTypes); casByUser.put("user" + n, asList(cas)); n++; } return casByUser; }
Example #29
Source File: Conll2003FormatSupport.java From webanno with Apache License 2.0 | 5 votes |
@Override public AnalysisEngineDescription getWriterDescription(Project aProject, TypeSystemDescription aTSD, CAS aCAS) throws ResourceInitializationException { return createEngineDescription(Conll2003Writer.class, aTSD); }
Example #30
Source File: XMLParser_impl.java From uima-uimaj with Apache License 2.0 | 5 votes |
public TypeSystemDescription parseTypeSystemDescription(XMLInputSource aInput, ParsingOptions aOptions) throws InvalidXMLException { // attempt to locate resource specifier schema XMLizable object = parse(aInput, RESOURCE_SPECIFIER_NAMESPACE, SCHEMA_URL, aOptions); if (object instanceof TypeSystemDescription) { return (TypeSystemDescription) object; } else { throw new InvalidXMLException(InvalidXMLException.INVALID_CLASS, new Object[] { TypeSystemDescription.class.getName(), object.getClass().getName() }); } }