org.hl7.fhir.dstu3.model.Practitioner Java Examples

private void makeDocumentReference(CDAUtilities cda, Convert convert, Element doc, Context context) throws Exception {
	scanSection("document", doc);
	DocumentReference ref = new DocumentReference();
	ref.setId(context.baseId+"-document");
	ref.setMasterIdentifier(convert.makeIdentifierFromII(cda.getChild(doc, "id")));
	ref.setSubject(context.subjectRef);
	ref.setType(inspectCode(convert.makeCodeableConceptFromCD(cda.getChild(doc, "code")), null));
	ref.addAuthor(context.authorRef);
	ref.setCreatedElement(convert.makeDateTimeFromTS(cda.getChild(doc, "effectiveTime")));
	ref.setIndexedElement(InstantType.now());
	ref.setStatus(DocumentReferenceStatus.CURRENT);
	ref.addSecurityLabel(inspectCode(convert.makeCodeableConceptFromCD(cda.getChild(doc, "confidentialityCode")), null));
	DocumentReferenceContentComponent cnt = ref.addContent();
	cnt.getAttachment().setContentType("application/hl7-v3+xml").setUrl("Binary/"+context.baseId).setLanguage(convertLanguage(cda.getChild(doc, "language")));
	//		for (Element ti : cda.getChildren(doc, "templateId"))
	//			cnt.addFormat().setSystem("urn:oid:1.3.6.1.4.1.19376.1.2.3").setCode(value)("urn:oid:"+ti.getAttribute("root"));
	ref.setContext(new DocumentReferenceContextComponent());
	ref.getContext().setPeriod(convert.makePeriodFromIVL(cda.getChild(cda.getChild(doc, "serviceEvent"), "effectiveTime")));
	for (CodeableConcept cc : context.encounter.getType())
		ref.getContext().addEvent(cc);
	ref.setDescription(cda.getChild(doc, "title").getTextContent());
	ref.setCustodian(new Reference().setReference("Organization/"+processOrganization(cda.getDescendent(doc, "custodian/assignedCustodian/representedCustodianOrganization"), cda, convert, context).getId()));
	Practitioner p = processPerformer(cda, convert, context, cda.getChild(doc, "legalAuthenticator"), "assignedEntity", "assignedPerson");
	ref.setAuthenticator(new Reference().setReference("Practitioner/"+p.getId()).setDisplay(p.getUserString("display")));
	saveResource(ref);
}
 

@Update
public MethodOutcome updatePractitioner(HttpServletRequest theRequest, @ResourceParam Practitioner practitioner, @IdParam IdType theId, @ConditionalUrlParam String theConditional, RequestDetails theRequestDetails) {

	resourcePermissionProvider.checkPermission("update");
    MethodOutcome method = new MethodOutcome();
    method.setCreated(true);
    OperationOutcome opOutcome = new OperationOutcome();

    method.setOperationOutcome(opOutcome);
    try {
    Practitioner newPractitioner = practitionerDao.create(ctx,practitioner, theId, theConditional);
    method.setId(newPractitioner.getIdElement());
    method.setResource(newPractitioner);
    } catch (Exception ex) {

        ProviderResponseLibrary.handleException(method,ex);
    }



    return method;
}
 

@Create
public MethodOutcome createPractitioner(HttpServletRequest theRequest, @ResourceParam Practitioner practitioner) {

	resourcePermissionProvider.checkPermission("create");
    MethodOutcome method = new MethodOutcome();
    method.setCreated(true);
    OperationOutcome opOutcome = new OperationOutcome();

    method.setOperationOutcome(opOutcome);
    try {
    Practitioner newPractitioner = practitionerDao.create(ctx,practitioner, null, null);
    method.setId(newPractitioner.getIdElement());
    method.setResource(newPractitioner);
    } catch (Exception ex) {

        ProviderResponseLibrary.handleException(method,ex);
    }


    return method;
}
 

private Practitioner makeAuthor(CDAUtilities cda, Convert convert, Element doc, Context context, String id) throws Exception {
	Element a = cda.getChild(doc, "author");
	scanSection("Author", a);
	Practitioner author = processPerformer(cda, convert, context, a, "assignedAuthor", "assignedPerson");
	context.authorRef = new Reference().setDisplay(author.getUserString("display")).setReference("Practitioner/"+author.getId());
	return author;
}
 

@Read
public Practitioner getPractitioner
        (@IdParam IdType internalId) {
	resourcePermissionProvider.checkPermission("read");
    Practitioner practitioner = practitionerDao.read(ctx, internalId);

    if ( practitioner == null) {
        throw OperationOutcomeFactory.buildOperationOutcomeException(
                new ResourceNotFoundException("No Patient/" + internalId.getIdPart()),
                 OperationOutcome.IssueType.NOTFOUND);
    }

    return practitioner;
}
 

@Test
public void testTransformer(){

    PractitionerEntity practitionerEntity = new PractitionerEntityBuilder()
            .addName("Dr", "Jenny", "Jones")
            .addAddress("Church Lane Surgery", "Holmfirth", null,
                    "Halifax", "West Yorkshire", "HX1 2TT")
            .build();

    Practitioner practitioner = transformer.transform(practitionerEntity);
    assertThat(practitioner, not(nullValue()));
    assertThat(practitioner.getId(), not(nullValue()));
    assertThat(practitioner.getId(), equalTo((new Long(PractitionerEntityBuilder.DEFAULT_ID)).toString()));
    assertThat(practitioner.getActive(), equalTo(true));

    List<HumanName> practitionerNames = practitioner.getName();
    assertThat(practitionerNames, not(nullValue()));
    assertThat(practitionerNames.size(), equalTo(1));
    //assertThat(practitionerNames.get(0).getUse(), equalTo(HumanName.NameUse.USUAL));
    HumanName name = practitionerNames.get(0);
    assertThat(name.getPrefixAsSingleString(), equalTo("Dr"));
    assertThat(name.getGivenAsSingleString(), equalTo("Jenny"));
    assertThat(name.getFamily(), equalTo("Jones"));

    assertThat(practitioner.getAddress(), not(nullValue()));
    List<Address> addresses = practitioner.getAddress();
    assertThat(addresses.size(), equalTo(1));
    Address address = addresses.get(0);
    assertThat(address.getLine().get(0).getValue(), equalTo("Church Lane Surgery"));
    assertThat(address.getLine().get(1).getValue(), equalTo("Holmfirth"));
    assertThat(address.getLine().size(), equalTo(2));
    assertThat(address.getDistrict(), equalTo("West Yorkshire"));
    assertThat(address.getCity(), equalTo("Halifax"));
    assertThat(address.getPostalCode(), equalTo("HX1 2TT"));
    assertThat(address.getUse(), equalTo(Address.AddressUse.WORK));

}
 

/**
 * Find the Practitioner entry in this bundle, and return the associated "fullUrl"
 * attribute.
 * @param clinician A given clinician.
 * @param bundle The current bundle being generated.
 * @return Practitioner.fullUrl if found, otherwise null.
 */
private static String findPractitioner(Clinician clinician, Bundle bundle) {
  for (BundleEntryComponent entry : bundle.getEntry()) {
    if (entry.getResource().fhirType().equals("Practitioner")) {
      Practitioner doc = (Practitioner) entry.getResource();
      if (doc.getIdentifierFirstRep().getValue().equals("" + clinician.identifier)) {
        return entry.getFullUrl();
      }
    }
  }
  return null;
}
 

/**
 * Map the clinician into a FHIR Practitioner resource, and add it to the given Bundle.
 * @param bundle The Bundle to add to
 * @param clinician The clinician
 * @return The added Entry
 */
protected static BundleEntryComponent practitioner(Bundle bundle, Clinician clinician) {
  Practitioner practitionerResource = new Practitioner();

  practitionerResource.addIdentifier().setSystem("http://hl7.org/fhir/sid/us-npi")
  .setValue("" + clinician.identifier);
  practitionerResource.setActive(true);
  practitionerResource.addName().setFamily(
      (String) clinician.attributes.get(Clinician.LAST_NAME))
    .addGiven((String) clinician.attributes.get(Clinician.FIRST_NAME))
    .addPrefix((String) clinician.attributes.get(Clinician.NAME_PREFIX));

  Address address = new Address()
      .addLine((String) clinician.attributes.get(Clinician.ADDRESS))
      .setCity((String) clinician.attributes.get(Clinician.CITY))
      .setPostalCode((String) clinician.attributes.get(Clinician.ZIP))
      .setState((String) clinician.attributes.get(Clinician.STATE));
  if (COUNTRY_CODE != null) {
    address.setCountry(COUNTRY_CODE);
  }
  practitionerResource.addAddress(address);

  if (clinician.attributes.get(Person.GENDER).equals("M")) {
    practitionerResource.setGender(AdministrativeGender.MALE);
  } else if (clinician.attributes.get(Person.GENDER).equals("F")) {
    practitionerResource.setGender(AdministrativeGender.FEMALE);
  }

  return newEntry(bundle, practitionerResource, clinician.getResourceID());
}
 

@Override
public Class<Practitioner> getResourceType() {
    return Practitioner.class;
}
 

@Validate
public MethodOutcome testResource(@ResourceParam Practitioner resource,
                              @Validate.Mode ValidationModeEnum theMode,
                              @Validate.Profile String theProfile) {
    return resourceTestProvider.testResource(resource,theMode,theProfile);
}
 

@Override
public Practitioner transform(final PractitionerEntity practitionerEntity) {
    final Practitioner practitioner = new Practitioner();

    Meta meta = new Meta().addProfile(CareConnectProfile.Practitioner_1);

    if (practitionerEntity.getUpdated() != null) {
        meta.setLastUpdated(practitionerEntity.getUpdated());
    }
    else {
        if (practitionerEntity.getCreated() != null) {
            meta.setLastUpdated(practitionerEntity.getCreated());
        }
    }
    practitioner.setMeta(meta);
    if (practitionerEntity.getActive() != null) {
        practitioner.setActive(practitionerEntity.getActive());
    }

    for(PractitionerIdentifier identifier :practitionerEntity.getIdentifiers())
    {
        Identifier ident = practitioner.addIdentifier();
        ident = daoutils.getIdentifier(identifier, ident);
    }

    practitioner.setId(practitionerEntity.getId().toString());

    if (practitionerEntity.getNames().size() > 0) {

        practitioner.addName()
                .setFamily(practitionerEntity.getNames().get(0).getFamilyName())
                .addGiven(practitionerEntity.getNames().get(0).getGivenName())
                .addPrefix(practitionerEntity.getNames().get(0).getPrefix());
    }
    for(int f=0;f<practitionerEntity.getTelecoms().size();f++)
    {
        practitioner.addTelecom()
                .setSystem(practitionerEntity.getTelecoms().get(f).getSystem())
                .setValue(practitionerEntity.getTelecoms().get(f).getValue())
                .setUse(practitionerEntity.getTelecoms().get(f).getTelecomUse());
    }


    for (PractitionerAddress practitionerAddress : practitionerEntity.getAddresses()){
        Address address = addressTransformer.transform(practitionerAddress);
        practitioner.addAddress(address);
    }

    if (practitionerEntity.getGender() !=null)
    {
        practitioner.setGender(daoutils.getGender(practitionerEntity.getGender()));
    }

    return practitioner;

}
 

public PractitionerBuilder() {
    super(new Practitioner());
}
 

Practitioner read(FhirContext ctx, IdType theId); 

Practitioner create(FhirContext ctx, Practitioner practitioner, @IdParam IdType theId, @ConditionalUrlParam String theConditional) throws OperationOutcomeException;