Python blocks.extensions.Timing() Examples

def test_timing():
    main_loop = MockMainLoop(extensions=[Timing(),
                                         FinishAfter(after_n_epochs=2)])
    main_loop.run() 

def main(save_to, num_epochs):
    mlp = MLP([Tanh(), Softmax()], [784, 100, 10],
              weights_init=IsotropicGaussian(0.01),
              biases_init=Constant(0))
    mlp.initialize()
    x = tensor.matrix('features')
    y = tensor.lmatrix('targets')
    probs = mlp.apply(x)
    cost = CategoricalCrossEntropy().apply(y.flatten(), probs)
    error_rate = MisclassificationRate().apply(y.flatten(), probs)

    cg = ComputationGraph([cost])
    W1, W2 = VariableFilter(roles=[WEIGHT])(cg.variables)
    cost = cost + .00005 * (W1 ** 2).sum() + .00005 * (W2 ** 2).sum()
    cost.name = 'final_cost'

    mnist_train = MNIST(("train",))
    mnist_test = MNIST(("test",))

    algorithm = GradientDescent(
        cost=cost, parameters=cg.parameters,
        step_rule=Scale(learning_rate=0.1))
    extensions = [Timing(),
                  FinishAfter(after_n_epochs=num_epochs),
                  DataStreamMonitoring(
                      [cost, error_rate],
                      Flatten(
                          DataStream.default_stream(
                              mnist_test,
                              iteration_scheme=SequentialScheme(
                                  mnist_test.num_examples, 500)),
                          which_sources=('features',)),
                      prefix="test"),
                  TrainingDataMonitoring(
                      [cost, error_rate,
                       aggregation.mean(algorithm.total_gradient_norm)],
                      prefix="train",
                      after_epoch=True),
                  Checkpoint(save_to),
                  Printing()]

    if BLOCKS_EXTRAS_AVAILABLE:
        extensions.append(Plot(
            'MNIST example',
            channels=[
                ['test_final_cost',
                 'test_misclassificationrate_apply_error_rate'],
                ['train_total_gradient_norm']]))

    main_loop = MainLoop(
        algorithm,
        Flatten(
            DataStream.default_stream(
                mnist_train,
                iteration_scheme=SequentialScheme(
                    mnist_train.num_examples, 50)),
            which_sources=('features',)),
        model=Model(cost),
        extensions=extensions)

    main_loop.run() 

def run():
    streams = create_celeba_streams(training_batch_size=100,
                                    monitoring_batch_size=500,
                                    include_targets=True)
    main_loop_stream = streams[0]
    train_monitor_stream = streams[1]
    valid_monitor_stream = streams[2]

    cg, bn_dropout_cg = create_training_computation_graphs()

    # Compute parameter updates for the batch normalization population
    # statistics. They are updated following an exponential moving average.
    pop_updates = get_batch_normalization_updates(bn_dropout_cg)
    decay_rate = 0.05
    extra_updates = [(p, m * decay_rate + p * (1 - decay_rate))
                     for p, m in pop_updates]

    # Prepare algorithm
    step_rule = Adam()
    algorithm = GradientDescent(cost=bn_dropout_cg.outputs[0],
                                parameters=bn_dropout_cg.parameters,
                                step_rule=step_rule)
    algorithm.add_updates(extra_updates)

    # Prepare monitoring
    cost = bn_dropout_cg.outputs[0]
    cost.name = 'cost'
    train_monitoring = DataStreamMonitoring(
        [cost], train_monitor_stream, prefix="train",
        before_first_epoch=False, after_epoch=False, after_training=True,
        updates=extra_updates)

    cost, accuracy = cg.outputs
    cost.name = 'cost'
    accuracy.name = 'accuracy'
    monitored_quantities = [cost, accuracy]
    valid_monitoring = DataStreamMonitoring(
        monitored_quantities, valid_monitor_stream, prefix="valid",
        before_first_epoch=False, after_epoch=False, every_n_epochs=5)

    # Prepare checkpoint
    checkpoint = Checkpoint(
        'celeba_classifier.zip', every_n_epochs=5, use_cpickle=True)

    extensions = [Timing(), FinishAfter(after_n_epochs=50), train_monitoring,
                  valid_monitoring, checkpoint, Printing(), ProgressBar()]
    main_loop = MainLoop(data_stream=main_loop_stream, algorithm=algorithm,
                         extensions=extensions)
    main_loop.run() 

def run(discriminative_regularization=True):
    streams = create_celeba_streams(training_batch_size=100,
                                    monitoring_batch_size=500,
                                    include_targets=False)
    main_loop_stream, train_monitor_stream, valid_monitor_stream = streams[:3]

    # Compute parameter updates for the batch normalization population
    # statistics. They are updated following an exponential moving average.
    rval = create_training_computation_graphs(discriminative_regularization)
    cg, bn_cg, variance_parameters = rval
    pop_updates = list(
        set(get_batch_normalization_updates(bn_cg, allow_duplicates=True)))
    decay_rate = 0.05
    extra_updates = [(p, m * decay_rate + p * (1 - decay_rate))
                     for p, m in pop_updates]

    model = Model(bn_cg.outputs[0])
    selector = Selector(
        find_bricks(
            model.top_bricks,
            lambda brick: brick.name in ('encoder_convnet', 'encoder_mlp',
                                         'decoder_convnet', 'decoder_mlp')))
    parameters = list(selector.get_parameters().values()) + variance_parameters

    # Prepare algorithm
    step_rule = Adam()
    algorithm = GradientDescent(cost=bn_cg.outputs[0],
                                parameters=parameters,
                                step_rule=step_rule)
    algorithm.add_updates(extra_updates)

    # Prepare monitoring
    monitored_quantities_list = []
    for graph in [bn_cg, cg]:
        cost, kl_term, reconstruction_term = graph.outputs
        cost.name = 'nll_upper_bound'
        avg_kl_term = kl_term.mean(axis=0)
        avg_kl_term.name = 'avg_kl_term'
        avg_reconstruction_term = -reconstruction_term.mean(axis=0)
        avg_reconstruction_term.name = 'avg_reconstruction_term'
        monitored_quantities_list.append(
            [cost, avg_kl_term, avg_reconstruction_term])
    train_monitoring = DataStreamMonitoring(
        monitored_quantities_list[0], train_monitor_stream, prefix="train",
        updates=extra_updates, after_epoch=False, before_first_epoch=False,
        every_n_epochs=5)
    valid_monitoring = DataStreamMonitoring(
        monitored_quantities_list[1], valid_monitor_stream, prefix="valid",
        after_epoch=False, before_first_epoch=False, every_n_epochs=5)

    # Prepare checkpoint
    save_path = 'celeba_vae_{}regularization.zip'.format(
        '' if discriminative_regularization else 'no_')
    checkpoint = Checkpoint(save_path, every_n_epochs=5, use_cpickle=True)

    extensions = [Timing(), FinishAfter(after_n_epochs=75), train_monitoring,
                  valid_monitoring, checkpoint, Printing(), ProgressBar()]
    main_loop = MainLoop(data_stream=main_loop_stream,
                         algorithm=algorithm, extensions=extensions)
    main_loop.run()