Java Code Examples for com.google.common.collect.Range#all()

public Range<OffsetDateTime> asRange(OffsetDateTime onOrAfterDateTime, OffsetDateTime beforeDateTime) {

        if (onOrAfterDateTime != null && beforeDateTime != null) {
            return Range.closedOpen(onOrAfterDateTime, beforeDateTime);
        }

        if (onOrAfterDateTime != null) {
            return Range.atLeast(onOrAfterDateTime);
        }

        else if (beforeDateTime != null) {
            return Range.lessThan(beforeDateTime);
        }

        return Range.all();
    }
 

private Range<Integer> getDpiRange(int targetDpi, ImmutableSet<Integer> alternatives) {
  if (alternatives.isEmpty()) {
    return Range.all();
  }

  Optional<Integer> lowMidPoint =
      getNearestLowerDpi(targetDpi, alternatives)
          .map(lowerDpi -> getMidPoint(lowerDpi, targetDpi))
          .map(val -> (int) Math.ceil(val));
  Optional<Integer> highMidPoint =
      getNearestHigherDpi(targetDpi, alternatives)
          .map(higherDpi -> getMidPoint(targetDpi, higherDpi))
          .map(val -> (int) Math.floor(val));

  if (!lowMidPoint.isPresent()) {
    return Range.atMost(highMidPoint.get());
  }
  if (!highMidPoint.isPresent()) {
    return Range.atLeast(lowMidPoint.get());
  }
  return Range.closed(lowMidPoint.get(), highMidPoint.get());
}
 

/**
 * @see io.github.mzmine.datamodel.RawDataFile#getScanNumbers(int)
 */
@Override
public @Nonnull int[] getScanNumbers(int msLevel) {
  if (scanNumbersCache.containsKey(msLevel))
    return scanNumbersCache.get(msLevel);
  Range<Double> all = Range.all();
  int scanNumbers[] = getScanNumbers(msLevel, all);
  scanNumbersCache.put(msLevel, scanNumbers);
  return scanNumbers;
}
 

public static Range makeRange(ByteString startKey, ByteString endKey) {
  if (startKey.isEmpty() && endKey.isEmpty()) {
    return Range.all();
  }
  if (startKey.isEmpty()) {
    return Range.lessThan(Comparables.wrap(endKey));
  } else if (endKey.isEmpty()) {
    return Range.atLeast(Comparables.wrap(startKey));
  }
  return Range.closedOpen(Comparables.wrap(startKey), Comparables.wrap(endKey));
}
 

/** Weakens a term so that it checks only what is not implied by predicates.
 *
 * <p>The term is broken into "ref comparison constant",
 * for example "$0 &lt; 5".
 *
 * <p>Examples:
 * <ul>
 *
 * <li>{@code residue($0 < 10, [$0 < 5])} returns {@code true}
 *
 * <li>{@code residue($0 < 10, [$0 < 20, $0 > 0])} returns {@code $0 < 10}
 * </ul>
 */
private <C extends Comparable<C>> Range<C> residue(RexNode ref, Range<C> r0,
    List<RexNode> predicates, Class<C> clazz) {
  Range<C> result = r0;
  for (RexNode predicate : predicates) {
    switch (predicate.getKind()) {
    case EQUALS:
    case LESS_THAN:
    case LESS_THAN_OR_EQUAL:
    case GREATER_THAN:
    case GREATER_THAN_OR_EQUAL:
      final RexCall call = (RexCall) predicate;
      if (call.operands.get(0).equals(ref)
          && call.operands.get(1) instanceof RexLiteral) {
        final RexLiteral literal = (RexLiteral) call.operands.get(1);
        final C c1 = literal.getValueAs(clazz);
        final Range<C> r1 = range(predicate.getKind(), c1);
        if (result.encloses(r1)) {
          // Given these predicates, term is always satisfied.
          // e.g. r0 is "$0 < 10", r1 is "$0 < 5"
          result = Range.all();
          continue;
        }
        if (result.isConnected(r1)) {
          result = result.intersection(r1);
          continue;
        }
        // Ranges do not intersect. Return null meaning the empty range.
        return null;
      }
    }
  }
  return result;
}
 

@Override
public boolean refresh() {
  GPCalendarCalc calendar = myDstNode.myTask.getManager().getCalendar();
  TaskDependencyConstraint.Collision nextCollision = myDep.getConstraint().getCollision();
  Date acceptableStart = nextCollision.getAcceptableStart().getTime();
  isWeak = !nextCollision.isActive() && myDep.getHardness() == Hardness.RUBBER;
  switch (nextCollision.getVariation()) {
  case TaskDependencyConstraint.Collision.START_EARLIER_VARIATION:
    if (0 == (calendar.getDayMask(acceptableStart) & DayMask.WORKING)) {
      acceptableStart = calendar.findClosest(acceptableStart, myDstNode.myTask.getDuration().getTimeUnit(),
          GPCalendarCalc.MoveDirection.BACKWARD, GPCalendar.DayType.WORKING);
    }
    myStartRange = Range.upTo(acceptableStart, BoundType.CLOSED);
    break;
  case TaskDependencyConstraint.Collision.START_LATER_VARIATION:
    if (0 == (calendar.getDayMask(acceptableStart) & DayMask.WORKING)) {
      acceptableStart = calendar.findClosest(acceptableStart, myDstNode.myTask.getDuration().getTimeUnit(),
          GPCalendarCalc.MoveDirection.FORWARD, GPCalendar.DayType.WORKING);
    }
    myStartRange = Range.downTo(acceptableStart, BoundType.CLOSED);
    break;
  case TaskDependencyConstraint.Collision.NO_VARIATION:
    myStartRange = Range.singleton(acceptableStart);
    break;
  }
  myEndRange = Range.all();
  return true;
}
 

@Test
public void extremeCase() {
    Range r1 = Range.all();
    Range r2 = Range.all();

    Range a = Range.closedOpen(2, 5);

    Assert.assertTrue(RangeUtil.remove(r1, r2).equals(Lists.newArrayList()));
    Assert.assertTrue(RangeUtil.remove(r1, a).equals(Lists.newArrayList(Range.lessThan(2), Range.atLeast(5))));
}
 

public static <C extends Comparable<?>> Range<C> all()
{
    return Range.all();
}
 

private static ScopedRegion forModule(Module m) {
  return new AutoValue_SymbolTable_ScopedRegion(
      m.getPath().toString(), Range.all(), m.getInternalSymbolTable());
}
 

/**
 * For a given range of devices dpi served by a split, returns the range of resources that are
 * reachable from this split.
 *
 * <p>The reachable resources can cover a be different dpi range than that of the devices since a
 * resource with dpi smaller than the lowest dpi device can be still preferred by that device.
 *
 * @param deviceDpiRange range of device dpis to serve by a given split
 * @param values {@link ConfigValue} objects of a resource under consideration
 * @return range of resource config values that can be matched by any device served by the split
 */
@CheckReturnValue
private ImmutableList<ConfigValue> getReachableConfigValues(
    Range<Integer> deviceDpiRange, ImmutableList<ConfigValue> values, Version bundleVersion) {
  // We are calculating the lowest and highest dpi of the resource that could be matched by the
  // devices from the given deviceDpiRange.
  // We take the lowest eligible dpi device and find the best matching resource for it, similarly
  // at the other end of the servedDpiRange. Because the best matching is monotonic, all resource
  // configs between those extremes and no others could be matched by any device that falls into
  // that dpi range.

  Optional<Integer> lowestResourceDpi = Optional.empty();
  Optional<Integer> highestResourceDpi = Optional.empty();
  if (deviceDpiRange.hasLowerBound()) {
    lowestResourceDpi =
        Optional.of(
            selectBestConfigValue(values, deviceDpiRange.lowerEndpoint(), bundleVersion)
                .getConfig()
                .getDensity());
  }
  if (deviceDpiRange.hasUpperBound()) {
    highestResourceDpi =
        Optional.of(
            selectBestConfigValue(values, deviceDpiRange.upperEndpoint(), bundleVersion)
                .getConfig()
                .getDensity());
  }

  Range<Integer> effectiveDpiRange;

  if (deviceDpiRange.equals(Range.all())) {
    effectiveDpiRange = Range.all();
  } else if (!lowestResourceDpi.isPresent()) {
    effectiveDpiRange = Range.atMost(highestResourceDpi.get());
  } else if (!highestResourceDpi.isPresent()) {
    effectiveDpiRange = Range.atLeast(lowestResourceDpi.get());
  } else {
    effectiveDpiRange = Range.closed(lowestResourceDpi.get(), highestResourceDpi.get());
  }

  return values.stream()
      .filter(configValue -> effectiveDpiRange.contains(configValue.getConfig().getDensity()))
      .collect(toImmutableList());
}
 

public DataPointSearchCriteriaBuilder setCreationTimestampLowerEndpoint(OffsetDateTime lowerEndpoint) {
    this.creationTimestampLowerEndpoint = lowerEndpoint != null ? Range.atLeast(lowerEndpoint) : Range.all();
    return this;
}
 

@Override
public Range<Version> load(final Method key)  {
    final TypedColumn typedColumn = key.getAnnotation(TypedColumn.class);
    return typedColumn == null ? Range.all()
            : createVersionRange(typedColumn.fromVersion(), typedColumn.untilVersion());
}
 

/**
 * @see io.github.mzmine.datamodel.PeakList#getPeaksInsideMZRange(double, double)
 */
@Override
public Feature[] getPeaksInsideMZRange(RawDataFile file, Range<Double> mzRange) {
  Range<Double> all = Range.all();
  return getPeaksInsideScanAndMZRange(file, all, mzRange);
}
 

public DataPointSearchCriteriaBuilder setCreationTimestampUpperEndpoint(OffsetDateTime upperEndpoint) {
    this.creationTimestampUpperEndpoint = upperEndpoint != null ? Range.atMost(upperEndpoint) : Range.all();
    return this;
}
 

private void schedule(Node node) {
  Logger logger = GPLogger.getLogger(this);
  GPLogger.debug(logger, "Scheduling node %s", node);
  Range<Date> startRange = Range.all();
  Range<Date> endRange = Range.all();

  Range<Date> weakStartRange = Range.all();
  Range<Date> weakEndRange = Range.all();

  List<Date> subtaskRanges = Lists.newArrayList();
  List<DependencyEdge> incoming = node.getIncoming();
  GPLogger.debug(logger, ".. #incoming edges=%d", incoming.size());
  for (DependencyEdge edge : incoming) {
    if (!edge.refresh()) {
      continue;
    }
    if (edge instanceof ImplicitSubSuperTaskDependency) {
      subtaskRanges.add(edge.getStartRange().upperEndpoint());
      subtaskRanges.add(edge.getEndRange().lowerEndpoint());
    } else {
      if (edge.isWeak()) {
        weakStartRange = weakStartRange.intersection(edge.getStartRange());
        weakEndRange = weakEndRange.intersection(edge.getEndRange());
      } else {
        startRange = startRange.intersection(edge.getStartRange());
        endRange = endRange.intersection(edge.getEndRange());
      }
    }
    if (startRange.isEmpty() || endRange.isEmpty()) {
      GPLogger.logToLogger("both start and end ranges were calculated as empty for task=" + node.getTask() + ". Skipping it");
    }
  }
  GPLogger.debug(logger, "..Ranges: start=%s end=%s weakStart=%s weakEnd=%s", startRange, endRange, weakStartRange, weakEndRange);

  Range<Date> subtasksSpan = subtaskRanges.isEmpty() ?
      Range.closed(node.getTask().getStart().getTime(), node.getTask().getEnd().getTime()) : Range.encloseAll(subtaskRanges);
  Range<Date> subtreeStartUpwards = subtasksSpan.span(Range.downTo(node.getTask().getStart().getTime(), BoundType.CLOSED));
  Range<Date> subtreeEndDownwards = subtasksSpan.span(Range.upTo(node.getTask().getEnd().getTime(), BoundType.CLOSED));
  GPLogger.debug(logger, "..Subtasks span=%s", subtasksSpan);

  if (!startRange.equals(Range.all())) {
    startRange = startRange.intersection(weakStartRange);
  } else if (!weakStartRange.equals(Range.all())) {
    startRange = weakStartRange.intersection(subtreeStartUpwards);
  }
  if (!endRange.equals(Range.all())) {
    endRange = endRange.intersection(weakEndRange);
  } else if (!weakEndRange.equals(Range.all())) {
    endRange = weakEndRange.intersection(subtreeEndDownwards);
  }
  if (node.getTask().getThirdDateConstraint() == TaskImpl.EARLIESTBEGIN && node.getTask().getThird() != null) {
    startRange = startRange.intersection(Range.downTo(node.getTask().getThird().getTime(), BoundType.CLOSED));
    GPLogger.debug(logger, ".. applying earliest start=%s. Now start range=%s", node.getTask().getThird(), startRange);
  }
  if (!subtaskRanges.isEmpty()) {
    startRange = startRange.intersection(subtasksSpan);
    endRange = endRange.intersection(subtasksSpan);
  }
  GPLogger.debug(logger, ".. finally, start range=%s", startRange);
  if (startRange.hasLowerBound()) {
    modifyTaskStart(node.getTask(), startRange.lowerEndpoint());
  }
  if (endRange.hasUpperBound()) {
    GPCalendarCalc cal = node.getTask().getManager().getCalendar();
    Date endDate = endRange.upperEndpoint();
    TimeUnit timeUnit = node.getTask().getDuration().getTimeUnit();
    if (DayMask.WORKING == (cal.getDayMask(endDate) & DayMask.WORKING)) {
      // in case if calculated end date falls on first day after holidays (say, on Monday)
      // we'll want to modify it a little bit, so that it falls on that holidays start
      // If we don't do this, it will be done automatically the next time task activities are recalculated,
      // and thus task end date will keep changing
      Date closestWorkingEndDate = cal.findClosest(
          endDate, timeUnit, GPCalendarCalc.MoveDirection.BACKWARD, GPCalendar.DayType.WORKING);
      Date closestNonWorkingEndDate = cal.findClosest(
          endDate, timeUnit, GPCalendarCalc.MoveDirection.BACKWARD, GPCalendar.DayType.NON_WORKING, closestWorkingEndDate);
      // If there is a non-working date between current task end and closest working date
      // then we're really just after holidays
      if (closestNonWorkingEndDate != null && closestWorkingEndDate.before(closestNonWorkingEndDate)) {
        // we need to adjust-right closest working date to position to the very beginning of the holidays interval
        Date nonWorkingPeriodStart = timeUnit.adjustRight(closestWorkingEndDate);
        if (nonWorkingPeriodStart.after(node.getTask().getStart().getTime())) {
          endDate = nonWorkingPeriodStart;
        }
      }
    }
    modifyTaskEnd(node.getTask(), endDate);
  }
}
 

@Override
public PeakListRow[] getRowsInsideMZRange(Range<Double> mzRange) {
  Range<Double> all = Range.all();
  return getRowsInsideScanAndMZRange(all, mzRange);
}
 

@Override
public List<ModularFeatureListRow> getRowsInsideScanRange(Range<Float> rtRange) {
  Range<Double> all = Range.all();
  return getRowsInsideScanAndMZRange(rtRange, all);
}
 

@Override
public @Nonnull Range<Double> getScanningMZRange() {
  // TODO Auto-generated method stub
  return Range.all();
}
 

/**
 * Returns all peaks overlapping with a retention time range
 * 
 * @param startRT Start of the retention time range
 * @param endRT End of the retention time range
 * @return
 */
@Override
public List<ModularFeature> getPeaksInsideScanRange(RawDataFile raw, Range<Float> rtRange) {
  Range<Double> all = Range.all();
  return getPeaksInsideScanAndMZRange(raw, rtRange, all);
}
 

/**
 * Returns all peaks overlapping with a retention time range
 * 
 * @param startRT Start of the retention time range
 * @param endRT End of the retention time range
 * @return
 */
@Override
public Feature[] getPeaksInsideScanRange(RawDataFile file, Range<Double> rtRange) {
  Range<Double> all = Range.all();
  return getPeaksInsideScanAndMZRange(file, rtRange, all);
}