Java Code Examples for org.hl7.fhir.utilities.xhtml.XhtmlNode#addText()

private  <T extends Resource> void addCsRef(ConceptSetComponent inc, XhtmlNode li, T cs) {
  String ref = null;
  if (cs != null) {
    ref = (String) cs.getUserData("filename");
    if (Utilities.noString(ref))
      ref = (String) cs.getUserData("path");
  }
  if (cs != null && ref != null) {
    if (!Utilities.noString(prefix) && ref.startsWith("http://hl7.org/fhir/"))
      ref = ref.substring(20)+"/index.html";
    else if (!ref.endsWith(".html"))
        ref = ref + ".html";
    XhtmlNode a = li.addTag("a");
    a.setAttribute("href", prefix+ref.replace("\\", "/"));
    a.addText(inc.getSystem().toString());
  } else
    li.addText(inc.getSystem().toString());
}
 

private void addCodeToTable(boolean isAbstract, String system, String code, String display, XhtmlNode td) {
  CodeSystem e = context.fetchCodeSystem(system);
  if (e == null || e.getContent() != org.hl7.fhir.r4.model.CodeSystem.CodeSystemContentMode.COMPLETE) {
    if (isAbstract)
      td.i().setAttribute("title", ABSTRACT_CODE_HINT).addText(code);
    else if ("http://snomed.info/sct".equals(system)) {
      td.ah(sctLink(code)).addText(code);
    } else if ("http://loinc.org".equals(system)) {
        td.ah("http://details.loinc.org/LOINC/"+code+".html").addText(code);
    } else        
      td.addText(code);
  } else {
    String href = prefix+getCsRef(e);
    if (href.contains("#"))
      href = href + "-"+Utilities.nmtokenize(code);
    else
      href = href + "#"+e.getId()+"-"+Utilities.nmtokenize(code);
    if (isAbstract)
      td.ah(href).setAttribute("title", ABSTRACT_CODE_HINT).i().addText(code);
    else
      td.ah(href).addText(code);
  }
}
 

private void renderAnnotation(Annotation a, XhtmlNode x, boolean showCodeDetails) throws FHIRException {
  StringBuilder s = new StringBuilder();
  if (a.hasAuthor()) {
    s.append("Author: ");

    if (a.hasAuthorReference())
      s.append(a.getAuthorReference().getReference());
    else if (a.hasAuthorStringType())
      s.append(a.getAuthorStringType().getValue());
  }


  if (a.hasTimeElement()) {
    if (s.length() > 0)
      s.append("; ");

    s.append("Made: ").append(a.getTimeElement().toHumanDisplay());
  }

  if (a.hasText()) {
    if (s.length() > 0)
      s.append("; ");

    s.append("Annotation: ").append(a.getText());
  }

  x.addText(s.toString());
}
 

private void addMapHeaders(XhtmlNode tr, Map<ConceptMap, String> mymaps) {
 for (ConceptMap m : mymaps.keySet()) {
 	XhtmlNode td = tr.addTag("td");
 	XhtmlNode b = td.addTag("b");
 	XhtmlNode a = b.addTag("a");
 	a.setAttribute("href", prefix+mymaps.get(m));
 	a.addText(m.hasDescription() ? m.getDescription() : m.getName());
 }
}
 

private void renderCoding(Coding c, XhtmlNode x, boolean showCodeDetails) {
  String s = "";
  if (c.hasDisplayElement())
    s = c.getDisplay();
  if (Utilities.noString(s))
    s = lookupCode(c.getSystem(), c.getCode());

  if (Utilities.noString(s))
    s = c.getCode();

  if (showCodeDetails) {
    x.addText(s+" (Details: "+describeSystem(c.getSystem())+" code "+c.getCode()+" = '"+lookupCode(c.getSystem(), c.getCode())+"', stated as '"+c.getDisplay()+"')");
  } else
    x.span(null, "{"+c.getSystem()+" "+c.getCode()+"}").addText(s);
}
 

private void renderQuantity(Quantity q, XhtmlNode x, boolean showCodeDetails) {
  if (q.hasComparator())
    x.addText(q.getComparator().toCode());
  x.addText(q.getValue().toString());
  if (q.hasUnit())
    x.addText(" "+q.getUnit());
  else if (q.hasCode())
    x.addText(" "+q.getCode());
  if (showCodeDetails && q.hasCode()) {
    XhtmlNode sp = x.addTag("span");
    sp.setAttribute("style", "background: LightGoldenRodYellow ");
    sp.addText(" (Details: "+describeSystem(q.getSystem())+" code "+q.getCode()+" = '"+lookupCode(q.getSystem(), q.getCode())+"')");
  }
}
 

protected void renderCoding(XhtmlNode x, Coding c, boolean showCodeDetails) {
  String s = "";
  if (c.hasDisplayElement())
    s = c.getDisplay();
  if (Utilities.noString(s))
    s = lookupCode(c.getSystem(), c.getCode());

  if (Utilities.noString(s))
    s = c.getCode();

  if (showCodeDetails) {
    x.addText(s+" (Details: "+TerminologyRenderer.describeSystem(c.getSystem())+" code "+c.getCode()+" = '"+lookupCode(c.getSystem(), c.getCode())+"', stated as '"+c.getDisplay()+"')");
  } else
    x.span(null, "{"+c.getSystem()+" "+c.getCode()+"}").addText(s);
}
 

public void renderReference(ResourceWrapper rw, XhtmlNode x, BaseWrapper r) throws UnsupportedEncodingException, IOException {
  XhtmlNode c = x;
  ResourceWithReference tr = null;
  String v;
  if (r.has("reference")) {
    v = r.get("reference").primitiveValue();
    tr = resolveReference(rw, v);

    if (!v.startsWith("#")) {
      if (tr != null && tr.getReference() != null)
        c = x.ah(tr.getReference());
      else
        c = x.ah(v);
    }
  } else {
    v = "";
  }
  // what to display: if text is provided, then that. if the reference was resolved, then show the generated narrative
  if (r.has("display")) {
    c.addText(r.get("display").primitiveValue());
    if (tr != null && tr.getResource() != null) {
      c.tx(". Generated Summary: ");
      new ProfileDrivenRenderer(context).generateResourceSummary(c, tr.getResource(), true, v.startsWith("#"));
    }
  } else if (tr != null && tr.getResource() != null) {
    new ProfileDrivenRenderer(context).generateResourceSummary(c, tr.getResource(), v.startsWith("#"), v.startsWith("#"));
  } else {
    c.addText(v);
  }
}
 

private void markNew(String name, boolean item, boolean res, boolean mand) {
  XhtmlNode tr = tbl.addTag("tr").setAttribute("class", item ? "diff-new-item" : "diff-new");
  XhtmlNode left = tr.addTag("td").setAttribute("class", "diff-left");
  XhtmlNode right = tr.addTag("td").setAttribute("class", "diff-right");
  String link = linker == null ? null : linker.getLink(name);
  if (link!= null)
    left.addTag("a").setAttribute("href", link).addText(name);
  else
    left.addText(name);
  if (!res && mand)
    right.ul().li().b().addText("Added Mandatory Element");    
  else
    right.ul().li().addText(res ? "Added Resource" : !name.contains(".") ? "Added Type" : mand ? "Added Mandatory Element " : "Added Element" );    
}
 

public void renderDateTime(XhtmlNode x, Base e) {
  if (e.hasPrimitiveValue())
    x.addText(((DateTimeType) e).toHumanDisplay());
}
 

private void renderHumanName(HumanName name, XhtmlNode x) {
  x.addText(displayHumanName(name));
}
 

private void renderAddress(Address address, XhtmlNode x) {
  x.addText(displayAddress(address));
}
 

private void renderLeaf(ResourceWrapper res, BaseWrapper ew, ElementDefinition defn, XhtmlNode x, boolean title, boolean showCodeDetails, Map<String, String> displayHints) throws FHIRException, UnsupportedEncodingException, IOException {
  if (ew == null)
    return;

  Base e = ew.getBase();

  if (e instanceof StringType)
    x.addText(((StringType) e).getValue());
  else if (e instanceof CodeType)
    x.addText(((CodeType) e).getValue());
  else if (e instanceof IdType)
    x.addText(((IdType) e).getValue());
  else if (e instanceof Extension)
    x.addText("Extensions: Todo");
  else if (e instanceof InstantType)
    x.addText(((InstantType) e).toHumanDisplay());
  else if (e instanceof DateTimeType)
    x.addText(((DateTimeType) e).toHumanDisplay());
  else if (e instanceof Base64BinaryType)
    x.addText(new Base64().encodeAsString(((Base64BinaryType) e).getValue()));
  else if (e instanceof org.hl7.fhir.dstu2016may.model.DateType)
    x.addText(((org.hl7.fhir.dstu2016may.model.DateType) e).toHumanDisplay());
  else if (e instanceof Enumeration) {
    Object ev = ((Enumeration<?>) e).getValue();
	x.addText(ev == null ? "" : ev.toString()); // todo: look up a display name if there is one
  } else if (e instanceof BooleanType)
    x.addText(((BooleanType) e).getValue().toString());
  else if (e instanceof CodeableConcept) {
    renderCodeableConcept((CodeableConcept) e, x, showCodeDetails);
  } else if (e instanceof Coding) {
    renderCoding((Coding) e, x, showCodeDetails);
  } else if (e instanceof Annotation) {
    renderAnnotation((Annotation) e, x);
  } else if (e instanceof Identifier) {
    renderIdentifier((Identifier) e, x);
  } else if (e instanceof org.hl7.fhir.dstu2016may.model.IntegerType) {
    x.addText(Integer.toString(((org.hl7.fhir.dstu2016may.model.IntegerType) e).getValue()));
  } else if (e instanceof org.hl7.fhir.dstu2016may.model.DecimalType) {
    x.addText(((org.hl7.fhir.dstu2016may.model.DecimalType) e).getValue().toString());
  } else if (e instanceof HumanName) {
    renderHumanName((HumanName) e, x);
  } else if (e instanceof SampledData) {
    renderSampledData((SampledData) e, x);
  } else if (e instanceof Address) {
    renderAddress((Address) e, x);
  } else if (e instanceof ContactPoint) {
    renderContactPoint((ContactPoint) e, x);
  } else if (e instanceof UriType) {
    renderUri((UriType) e, x);
  } else if (e instanceof Timing) {
    renderTiming((Timing) e, x);
  } else if (e instanceof Range) {
    renderRange((Range) e, x);
  } else if (e instanceof Quantity) {
    renderQuantity((Quantity) e, x, showCodeDetails);
  } else if (e instanceof Ratio) {
    renderQuantity(((Ratio) e).getNumerator(), x, showCodeDetails);
    x.addText("/");
    renderQuantity(((Ratio) e).getDenominator(), x, showCodeDetails);
  } else if (e instanceof Period) {
    Period p = (Period) e;
    x.addText(!p.hasStart() ? "??" : p.getStartElement().toHumanDisplay());
    x.addText(" --> ");
    x.addText(!p.hasEnd() ? "(ongoing)" : p.getEndElement().toHumanDisplay());
  } else if (e instanceof Reference) {
    Reference r = (Reference) e;
    XhtmlNode c = x;
    ResourceWithReference tr = null;
    if (r.hasReferenceElement()) {
      tr = resolveReference(res, r.getReference());
      if (!r.getReference().startsWith("#")) {
        if (tr != null && tr.getReference() != null)
          c = x.addTag("a").attribute("href", tr.getReference());
        else
          c = x.addTag("a").attribute("href", r.getReference());
      }
    }
    // what to display: if text is provided, then that. if the reference was resolved, then show the generated narrative
    if (r.hasDisplayElement()) {
      c.addText(r.getDisplay());
      if (tr != null) {
        c.addText(". Generated Summary: ");
        generateResourceSummary(c, tr.getResource(), true, r.getReference().startsWith("#"));
      }
    } else if (tr != null) {
      generateResourceSummary(c, tr.getResource(), r.getReference().startsWith("#"), r.getReference().startsWith("#"));
    } else {
      c.addText(r.getReference());
    }
  } else if (e instanceof Resource) {
    return;
  } else if (e instanceof ElementDefinition) {
    x.addText("todo-bundle");
  } else if (e != null && !(e instanceof Attachment) && !(e instanceof Narrative) && !(e instanceof Meta))
    throw new NotImplementedException("type "+e.getClass().getName()+" not handled yet");
}
 

private boolean generateComposition(ResourceContext rcontext, XhtmlNode x, ValueSet vs, boolean header) throws FHIRException, IOException {
 boolean hasExtensions = false;
  List<String> langs = new ArrayList<String>();

  if (header) {
    XhtmlNode h = x.h2();
    h.addText(vs.getName());
    addMarkdown(x, vs.getDescription());
    if (vs.hasCopyrightElement())
      generateCopyright(x, vs);
  }
  XhtmlNode p = x.para();
  p.tx("This value set includes codes from the following code systems:");

  XhtmlNode ul = x.ul();
  XhtmlNode li;
  for (ConceptSetComponent inc : vs.getCompose().getInclude()) {
    hasExtensions = genInclude(rcontext, ul, inc, "Include", langs) || hasExtensions;
  }
  for (ConceptSetComponent exc : vs.getCompose().getExclude()) {
    hasExtensions = genInclude(rcontext, ul, exc, "Exclude", langs) || hasExtensions;
  }

  // now, build observed languages

  if (langs.size() > 0) {
    Collections.sort(langs);
    x.para().b().tx("Additional Language Displays");
    XhtmlNode t = x.table( "codes");
    XhtmlNode tr = t.tr();
    tr.td().b().tx("Code");
    for (String lang : langs)
      tr.td().b().addText(describeLang(lang));
    for (ConceptSetComponent c : vs.getCompose().getInclude()) {
      for (ConceptReferenceComponent cc : c.getConcept()) {
        addLanguageRow(cc, t, langs);
      }
    }
  }

  return hasExtensions;
}
 

protected void renderAddress(XhtmlNode x, Address address) {
  x.addText(displayAddress(address));
}
 

protected void renderContactPoint(XhtmlNode x, ContactPoint contact) {
  x.addText(displayContactPoint(contact));
}
 

private void renderAddress(Address address, XhtmlNode x) {
  x.addText(displayAddress(address));
}
 

private void renderTiming(Timing s, XhtmlNode x) throws FHIRException {
  x.addText(displayTiming(s));
}
 

private VariablesForProfiling analyseSource(String ruleId, TransformContext context, VariablesForProfiling vars, StructureMapGroupRuleSourceComponent src, XhtmlNode td) throws Exception {
  VariableForProfiling var = vars.get(VariableMode.INPUT, src.getContext());
  if (var == null)
    throw new FHIRException("Rule \""+ruleId+"\": Unknown input variable "+src.getContext());
  PropertyWithType prop = var.getProperty();

  boolean optional = false;
  boolean repeating = false;

  if (src.hasCondition()) {
    optional = true;
  }

  if (src.hasElement()) {
    Property element = prop.getBaseProperty().getChild(prop.types.getType(), src.getElement());
    if (element == null)
      throw new Exception("Rule \""+ruleId+"\": Unknown element name "+src.getElement());
    if (element.getDefinition().getMin() == 0)
      optional = true;
    if (element.getDefinition().getMax().equals("*"))
      repeating = true;
    VariablesForProfiling result = vars.copy(optional, repeating);
    TypeDetails type = new TypeDetails(CollectionStatus.SINGLETON);
    for (TypeRefComponent tr : element.getDefinition().getType()) {
      if (!tr.hasCode())
        throw new Error("Rule \""+ruleId+"\": Element has no type");
      ProfiledType pt = new ProfiledType(tr.getCode());
      if (tr.hasProfile())
        pt.addProfile(tr.getProfile());
      if (element.getDefinition().hasBinding())
        pt.addBinding(element.getDefinition().getBinding());
      type.addType(pt);
  } 
    td.addText(prop.getPath()+"."+src.getElement()); 
    if (src.hasVariable())
      result.add(VariableMode.INPUT, src.getVariable(), new PropertyWithType(prop.getPath()+"."+src.getElement(), element, null, type));
  return result;
  } else {
    td.addText(prop.getPath()); // ditto!
    return vars.copy(optional, repeating);
  }
}
 

private void renderContactPoint(ContactPoint contact, XhtmlNode x) {
  x.addText(displayContactPoint(contact));
}